Information for 11-CGGTGGACCG (Motif 12)

T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
Reverse Opposite:
A G T C T A C G A C T G C A G T A G T C G A T C C G T A G A T C T A G C A T C G
p-value:1e-5561
log p-value:-1.281e+04
Information Content per bp:1.659
Number of Target Sequences with motif106967.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif30568.6
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets96.8 +/- 55.5bp
Average Position of motif in Background100.1 +/- 117.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGGTGGACCG--
--GCGGACCBWA
 T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G A C G T A C G T
A C G T A C G T A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A

WRKY25/MA1081.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGGTGGACCG
--GTTGACCG
 T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
A C G T A C G T C A T G G A C T A C G T A C T G C G T A A G T C A G T C T C A G

WRKY12/MA1075.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGGTGGACCG
-CGTTGACC-
 T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
A C G T T G A C C A T G G A C T A C G T C A T G C G T A G T A C A G T C A C G T

WRKY30/MA1083.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGACCG
NNCGTTGACC-
 A C G T T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
T G C A A T C G T A G C C T A G G A C T C A G T A C T G C T G A T A G C A G T C A C G T

WRKY38/MA1084.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGTGGACCG
-CGTTGACC-
 T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
A C G T G T A C C T A G G A C T A C G T A T C G G C T A G A T C A G T C A C G T

NCU02404(RRM)/Neurospora_crassa-RNCMPT00238-PBM/HughesRNA

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGTGGACCG
-GGAGGAA--
 T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
A C G T A C T G A C T G C G T A A C T G A C T G C G T A C T G A A C G T A C G T

WRKY60/MA1090.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGTGGACCG-
NCGTTGACCGN
 T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G A C G T
C G T A A T G C A C T G A C G T A C G T A C T G C G T A A G T C A G T C C T A G A C T G

RGT1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGTGGACCG
CGGANNA---
 T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
A G T C A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T

ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGGTGGACCG
GACGGTGG----
 A C G T A C G T T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
C A T G C T G A A G T C A C T G A C T G A G C T A C T G A T C G A C G T A C G T A C G T A C G T

AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGGTGGACCG
TTWHGGTGCACC-
 A C G T A C G T A C G T T A G C A T C G C T A G G C A T C T A G T C A G G T C A T G A C A T G C T C A G
G C A T C A G T C G T A G C T A A T C G T C A G C G A T T C A G A G T C C G T A A G T C G T A C A C G T