Information for 17-GCGAACRCAC (Motif 17)

A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
Reverse Opposite:
A T C G A G C T A C T G G A T C A C T G G A C T A C G T G T A C A C T G T G A C
p-value:1e-3570
log p-value:-8.221e+03
Information Content per bp:1.763
Number of Target Sequences with motif38192.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif8862.5
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets104.0 +/- 56.6bp
Average Position of motif in Background100.7 +/- 95.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCGAACRCAC--
GCGACCACACTG
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

lin-14/MA0261.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGAACRCAC
--GAACAC--
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T

MA0261.1_lin-14/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGAACRCAC
--GAACAC--
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T

kni/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCGAACRCAC
GGGAACAAA-
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
T A C G T A C G C T A G G T C A C G T A G T A C T C G A C G T A C G T A A C G T

Lm_0254(RRM)/Leishmania_major-RNCMPT00254-PBM/HughesRNA

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCGAACRCAC
-NGAACGA--
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
A C G T G C T A A C T G C G T A C G T A A G T C A C T G G T C A A C G T A C G T

OPI1(MacIsaac)/Yeast

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGAACRCAC
-CGAACCG--
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
A C G T A T G C A C T G G T C A C G T A G A T C G T A C T C A G A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00114-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCGAACRCAC-
---AACACACA
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C A C G T
A C G T A C G T A C G T G T C A G T C A G T A C C G T A G T A C G T C A G T A C C G T A

OPI1/MA0349.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGAACRCAC
-CGAACCG--
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
A C G T A T G C A C T G G T C A C G T A A G T C A G T C T C A G A C G T A C G T

OPI1/MA0349.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGAACRCAC
-CGAACCG--
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C
A C G T A T G C A C T G G T C A C G T A A G T C A G T C T C A G A C G T A C G T

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCGAACRCAC-
----ACACACA
 A C T G G T A C A C T G T G C A C T G A A G T C C T A G T G A C C T G A A T G C A C G T
A C G T A C G T A C G T A C G T G T C A G T A C C G T A G T A C C G T A G T A C G T C A