Information for 18-TGCGAGACGAAT (Motif 18)

G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
Reverse Opposite:
C T G A G A C T A G C T A G T C C T A G A C G T G T A C G C A T G A T C C T A G A G T C C T G A
p-value:1e-3210
log p-value:-7.392e+03
Information Content per bp:1.911
Number of Target Sequences with motif19020.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3278.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets106.3 +/- 50.4bp
Average Position of motif in Background100.1 +/- 43.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM3(RRM)/Homo_sapiens-RNCMPT00050-PBM/HughesRNA

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGCGAGACGAAT
---GATACGA--
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
A C G T A C G T A C G T C T A G C T G A C A G T C G T A G T A C C A T G C G T A A C G T A C G T

ANKHD1(KH)/Homo_sapiens-RNCMPT00002-PBM/HughesRNA

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGCGAGACGAAT
----AGACGTA-
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G G C A T C G T A A C G T

prd/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCGAGACGAAT-
AGCGTGACGGATT
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T A C G T
C T G A A T C G A G T C A C T G A C G T T C A G C G T A G T A C A C T G T C A G C T G A C G A T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCGAGACGAAT---
ACCGTGACTAATTNN
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Deaf1/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGCGAGACGAAT
-----CACGAA-
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C A G T C A C T G C G T A C T G A A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGCGAGACGAAT
NAGNTCTCGCGAGAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCGAGACGAAT
AGGTGHCAGACA---
 A C G T A C G T A C G T G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGCGAGACGAAT
-TCTAGACA---
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T

SUM1/SUM1_YPD/16-SUM1(Harbison)/Yeast

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCGAGACGAAT
-GCGTCAGAAAA
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
A C G T T C A G G A T C A T C G G C A T A G T C C T G A T A C G G C T A T C G A G T C A G C T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCGAGACGAAT
--CCAGACAG--
 G A C T T C A G A G T C C T A G C G T A C A T G C G T A A G T C C T A G T C G A C T G A G A C T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T