p-value: | 1e-3159 |
log p-value: | -7.276e+03 |
Information Content per bp: | 1.614 |
Number of Target Sequences with motif | 17881.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 2996.9 |
Percentage of Background Sequences with motif | 0.24% |
Average Position of motif in Targets | 97.6 +/- 47.4bp |
Average Position of motif in Background | 100.8 +/- 102.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
GCR1/Literature(Harbison)/Yeast
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TAGTCTHCCTCC --GGCTTCCAC- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TAGTCTHCCTCC- -TGTCTGDCACCT |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAGTCTHCCTCC TWGTCTGV---- |
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SRSF1(RRM)/Homo_sapiens-RNCMPT00109-PBM/HughesRNA
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGTCTHCCTCC -----NTCCTCC |
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E2F6/MA0471.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TAGTCTHCCTCC- --NCTTCCCGCCC |
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SRSF1(RRM)/Homo_sapiens-RNCMPT00108-PBM/HughesRNA
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGTCTHCCTCC -----NTCCTCC |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAGTCTHCCTCC- CTGTCTGTCACCT |
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NCU02404(RRM)/Neurospora_crassa-RNCMPT00238-PBM/HughesRNA
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGTCTHCCTCC -----TTCCTCC |
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SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGTCTHCCTCC -----NTCCTCC |
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B52(RRM)/Drosophila_melanogaster-RNCMPT00134-PBM/HughesRNA
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGTCTHCCTCC -----NCCCTCC |
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