Information for 20-TTAAGCCTAA (Motif 20)

A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G C T A G A G T C A C G T A G C T C G T A C G T A
p-value:1e-2705
log p-value:-6.230e+03
Information Content per bp:1.949
Number of Target Sequences with motif18482.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3457.4
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets108.1 +/- 61.3bp
Average Position of motif in Background99.2 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTAAGCCTAA----
NNWWAMCCTAAHWNN
 A C G T A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T C G A T C G T A C T G A G T C A A G T C A G T C A C G T C G T A C T G A G C A T C G A T C G A T G C T A

TBP3/MA1355.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTAAGCCTAA--
AATTAAACCCTAATT
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T A C G T
G C T A G C T A G C A T C G A T C G T A G C T A C T G A G T A C A G T C A G T C A C G T C G T A C T G A G C A T G A C T

MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTAAGCCTAA--
--NTGCCTAACT
 A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T A C G T
A C G T A C G T G A T C G A C T T C A G A G T C A G T C C G A T C G T A G T C A G A T C G C A T

bcd/dmmpmm(Down)/fly

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTAAGCCTAA
TTAATCC---
 A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A
G A C T G C A T C T G A T C G A C A G T T A G C G A T C A C G T A C G T A C G T

AT1G72740/MA1353.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTAAGCCTAA----
CNAAACCCTAAATCN
 A C G T A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T G A C C G A T C G T A C G T A C T G A T G A C G T A C A T G C G A C T C G T A C T G A G C T A G A C T G A T C G A T C

SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTAAGCCTAA-
-DAAACCTATD
 A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T
A C G T C G A T C T G A C G T A T C G A A G T C A G T C A C G T C G T A A G C T C G T A

MYB24/MA1037.1/Jaspar

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TTAAGCCTAA---
----ACCTAACNN
 A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G T A C G A T C C A G T C T G A G T C A G A T C G A C T G A C T

cad/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTAAGCCTAA-
----GCATAAA
 A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C G C T A C G A T G C T A G C T A G T C A

MYB62/MA1294.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTAAGCCTAA-------
--NTACCTAACTTTTNT
 A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G C A T C T G A A G T C A G T C C G A T C G T A G T C A G A T C G C A T G C A T C G A T G C A T C G A T G A C T

BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTAAGCCTAA--
--NNRCCTAACT
 A C G T A C G T C T G A C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A G T C C A G T T C A G A T G C A G T C C G A T C G T A G T C A G A T C G C A T