Information for 4-CGAWAACG (Motif 3)

G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G
Reverse Opposite:
G A T C T A C G A C G T G C A T C G A T A C G T A G T C C T A G
p-value:1e-9879
log p-value:-2.275e+04
Information Content per bp:1.576
Number of Target Sequences with motif782545.0
Percentage of Target Sequences with motif29.75%
Number of Background Sequences with motif304616.1
Percentage of Background Sequences with motif23.99%
Average Position of motif in Targets100.4 +/- 53.4bp
Average Position of motif in Background100.0 +/- 87.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CGAWAACG-
NDWCGAHDTCGW
 A C G T A C G T A C G T G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T
G C T A C G T A G C A T G A T C C T A G C G T A G C A T C G T A G C A T A G T C C T A G C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CGAWAACG----
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CGAWAACG--
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGAWAACG-----
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T A C G T G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

IRF5/MA1420.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGAWAACG-----
CCGAAACCGAAACT
 A C G T G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T A C G T A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

srp/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGAWAACG-
GCGATAAGAN
 A C G T G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T
A C T G G A T C A C T G C G T A A C G T C G T A C T G A A T C G T C G A A G T C

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CGAWAACG-
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

GZF3/MA0309.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGAWAACG
TGATAAGA
 G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G
G A C T A C T G C G T A A C G T C G T A G C T A T A C G T C G A

GZF3/MA0309.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGAWAACG
TGATAAGA
 G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G
G A C T A C T G C G T A A C G T C G T A G C T A T A C G T C G A

HAP1(MacIsaac)/Yeast

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGAWAACG--
CGATAACNCC
 G A T C T C A G T G C A G C T A C G T A T G C A A T G C C T A G A C G T A C G T
A T G C C T A G C T G A G C A T T C G A C G T A A G T C A G C T A T G C T A G C