Information for 1-GCCGCCCGTT (Motif 4)

C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
Reverse Opposite:
T G C A C G T A T A G C A T C G C T A G C T A G T G A C T A C G C T A G G T A C
p-value:1e-9856
log p-value:-2.270e+04
Information Content per bp:1.645
Number of Target Sequences with motif168560.0
Percentage of Target Sequences with motif6.41%
Number of Background Sequences with motif46762.4
Percentage of Background Sequences with motif3.68%
Average Position of motif in Targets97.5 +/- 54.2bp
Average Position of motif in Background99.7 +/- 112.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GCCGCCCGTT
-CCGCCCCTT
 C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
A C G T G A T C T A G C T A C G A G T C G T A C A G T C G T A C A G C T C A G T

ERF098/MA0999.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCGTT
CCGCCGCC----
 A C G T A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
T A G C T G A C T C A G A T G C G T A C T C A G G A T C T G A C A C G T A C G T A C G T A C G T

ERF096/MA0998.1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCGTT
CCGCCGCCAT--
 A C G T A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
A T G C T G A C C T A G T A G C G T A C C T A G A G T C G A T C C T G A G A C T A C G T A C G T

ERF008/MA0979.1/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCCGTT
CGCCGCCC---
 A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
G T A C C T A G T A G C T G A C T C A G G T A C T G A C A T G C A C G T A C G T A C G T

ERF13/MA1004.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCCGTT
CGCCGCCA---
 A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
T A G C A T C G T A G C A T G C A T C G A T G C A G T C C T G A A C G T A C G T A C G T

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCCGTT
CGCCGCC----
 A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
G A T C A C T G T A G C A T G C C T A G T A G C A T G C A C G T A C G T A C G T A C G T

ERF094/MA1049.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCCGTT
CGCCGCCG---
 A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
T G A C A C T G A G T C G T A C C T A G A T G C A G T C C T A G A C G T A C G T A C G T

ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCCGTT
YAGCCGCC----
 A C G T A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
G A T C G T C A A C T G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCCGTT
CAGCCGCC----
 A C G T A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
A G T C T G C A A C T G A G T C G T A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

ERF4/MA0992.1/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCGTT
CCGCCGCC----
 A C G T A C G T C A T G G A T C A T G C A C T G G A T C A G T C T A G C A T C G G C A T A C G T
T A G C A T G C T C A G T A G C T A G C T A C G A G T C G T A C A C G T A C G T A C G T A C G T