Information for 12-CHKKGSAGGMGG (Motif 10)

G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
Reverse Opposite:
T A G C A T G C A C T G T G A C G T A C G C A T T A C G G A T C G T C A T G C A C G A T C A T G
p-value:1e-615
log p-value:-1.418e+03
Information Content per bp:1.530
Number of Target Sequences with motif5716.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2575.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets100.9 +/- 52.1bp
Average Position of motif in Background101.5 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ABI3/MA0564.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CHKKGSAGGMGG
---TGCATGCAG
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T C G A T A T C G A G T C C G T A A C G T A T C G T A G C C T G A T C A G

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00082-PBM/HughesRNA

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CHKKGSAGGMGG
---NGCTGGCC-
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T A G C T A C T G A G T C C G A T A C T G A C T G G A T C A T G C A C G T

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00111-PBM/HughesRNA

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CHKKGSAGGMGG
---NGCTGGCC-
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T A G C T A C T G A G T C C A G T A C T G A C T G G T A C A T G C A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00108-PBM/HughesRNA

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CHKKGSAGGMGG
----GGAGGAN-
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T C G A C T G C T G A T C A G A C G T

RBFOX1(RRM)/Homo_sapiens-RNCMPT00168-PBM/HughesRNA

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CHKKGSAGGMGG
---TGCATGC--
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C G T A C T G G T A C A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CHKKGSAGGMGG
----GGAGGAN-
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A C T G C T G A T G C A A C G T

FOX-1(RRM)/Caenorhabditis_elegans-RNCMPT00017-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CHKKGSAGGMGG
---TGCATGA--
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C G T A C T G G T C A A C G T A C G T

B52(RRM)/Drosophila_melanogaster-RNCMPT00134-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CHKKGSAGGMGG
----GGAGGGN-
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T C G A C T G C T A G T C A G A C G T

A2BP1(RRM)/Drosophila_melanogaster-RNCMPT00123-PBM/HughesRNA

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CHKKGSAGGMGG
--NTGCATGC--
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T C T A G C G A T A C T G A G T C C G T A A C G T A C T G T G A C A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00106-PBM/HughesRNA

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CHKKGSAGGMGG
----GGAGGAN-
 G T A C G C T A A C G T C A G T C T A G A T G C C G T A C A T G A C T G T G A C T A C G A T C G
A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A C T G C T G A T G A C A C G T