Information for 18-GCGTGACACGCT (Motif 16)

A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
Reverse Opposite:
C T G A C T A G A G T C T A C G A G C T C T A G C G A T A G T C C G T A A G T C A C T G A G T C
p-value:1e-474
log p-value:-1.092e+03
Information Content per bp:1.924
Number of Target Sequences with motif1700.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif422.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets106.0 +/- 63.4bp
Average Position of motif in Background94.7 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCGTGACACGCT
GAGCGTGACCCC--
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCGTGACACGCT
TGCGTG-------
 A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGTGACACGCT
NCGTGACN----
 A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

HAC1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GCGTGACACGCT----
----GACACGCTGGCA
 A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A G T C G T A C

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGACACGCT
NNGTCGCGTGNCAC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGACACGCT
TTGCGTGCVA----
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T

CG33714(RRM)/Drosophila_melanogaster-RNCMPT00009-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGTGACACGCT
NGGCGTG-------
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
A T C G A T C G A C T G A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

prd/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGACACGCT
AGCGTGACGGATT
 A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
C T G A A T C G A G T C A C T G A C G T T C A G C G T A G T A C A C T G T C A G C T G A C G A T A C G T

h/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGACACGCT
NTGGCGCGTGCCNN---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
G T C A C A G T T A C G A C T G T G A C T C A G G A T C A C T G C A G T C T A G A G T C T A G C A C T G A T G C A C G T A C G T A C G T

STP4(MacIsaac)/Yeast

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCGTGACACGCT
CGCCGTGTCACGCGC-
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C T C G A A G T C C T A G A G T C A G C T
A G T C A C T G A G T C A G T C A C T G A G C T A C T G A C G T T A G C C T G A A T G C C T A G A G T C A C T G G T A C A C G T