Information for 19-GTAWCTCG (Motif 24)

A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
Reverse Opposite:
A G T C A C T G C T G A A C T G C G T A A C G T C G T A A G T C
p-value:1e-298
log p-value:-6.863e+02
Information Content per bp:1.929
Number of Target Sequences with motif6075.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3626.4
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets100.4 +/- 50.8bp
Average Position of motif in Background99.6 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARR18/MA0948.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GTAWCTCG--
NNCGTATCTNNNN
 A C G T A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G A C G T A C G T
C G T A A G C T A G T C C T A G C G A T C G T A A C G T A T G C C G A T G C A T A C T G C G T A A C G T

ARR14/MA0947.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTAWCTCG
GCGTATCT--
 A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
A T C G G T A C C T A G C G A T C T G A G C A T G T A C G A C T A C G T A C G T

OsRR22/MA1409.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTAWCTCG
ACCGTATCTT-
 A C G T A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
C G T A A T G C T A G C T C A G C G A T G T C A G C A T T G A C G A C T G C A T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTAWCTCG----
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

ARR11/MA0946.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTAWCTCG
CGTATCTT-
 A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
G A T C C T A G C G A T C G T A G A C T G T A C G C A T G C A T A C G T

LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTAWCTCG
ADAAATATCT--
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
C G T A C G A T C G T A T C G A T C G A A C G T C G T A A C G T A G T C G C A T A C G T A C G T

ARR10/MA0121.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTAWCTCG
GCGGATCT--
 A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
A T C G G T A C C T A G C T A G C G T A A G C T A G T C A C G T A C G T A C G T

RBM3(RRM)/Homo_sapiens-RNCMPT00050-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTAWCTCG
TCGTATC---
 A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
A C G T G T A C A C T G A C G T G T C A A G C T A G T C A C G T A C G T A C G T

TEIL(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTAWCTCG
ATGTACCT--
 A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
T C G A G A C T A T C G G C A T C T G A A G T C A T G C A G C T A C G T A C G T

ARR1/MA0945.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTAWCTCG
AGCGAATCTT-
 A C G T A C G T A C G T A C T G A C G T C G T A C G A T A G T C A G C T A G T C A C T G
C G T A A T C G T G A C T C A G C G T A C G T A C G A T G T A C G A C T G C A T A C G T