Information for 20-CCGTTGTTGG (Motif 25)

A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A C G T A A G T C C G T A C G T A A G T C A C T G A C T G
p-value:1e-295
log p-value:-6.794e+02
Information Content per bp:1.981
Number of Target Sequences with motif3698.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1885.7
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets99.3 +/- 48.6bp
Average Position of motif in Background98.8 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Aef1/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CCGTTGTTGG
---TTGTTG-
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T

Aef1/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CCGTTGTTGG
-TGTTGTTG-
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A C G T C G A T A C T G A C G T C G A T A C T G A C G T A C G T A C T G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CCGTTGTTGG
CCTTTGTT--
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

RBP1(RRM)/Drosophila_melanogaster-RNCMPT00058-PBM/HughesRNA

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCGTTGTTGG
TCGTTGT---
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A G C T A G T C A C T G A C G T A C G T A C T G C G A T A C G T A C G T A C G T

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCGTTGTTGG
-NGTTGTT--
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A C G T G C A T A C T G G C A T A C G T A T C G A G C T A G C T A C G T A C G T

SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCGTTGTTGG
CCCTTTTTGG
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
G A T C G A T C G A T C G C A T G C A T C G A T C G A T C A G T C A T G C A T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCGTTGTTGG
NCCATTGTTC-
 A C G T A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCGTTGTTGG
CCWTTGTY--
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCGTTGTTGG
CCATTGTTNY
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCGTTGTTGG
CCATTGTTYB
 A G T C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G C T A G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G