Information for 23-CGAGTAGAAT (Motif 29)

A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C A C G T C G T A A G T C A C G T A G T C A C T G
p-value:1e-168
log p-value:-3.880e+02
Information Content per bp:1.530
Number of Target Sequences with motif711.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif202.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets100.4 +/- 58.3bp
Average Position of motif in Background92.9 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.65
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM28(RRM)/Homo_sapiens-RNCMPT00049-PBM/HughesRNA

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CGAGTAGAAT
-GAGTAGA--
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C G T

At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CGAGTAGAAT
--AGTARAAW
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C G T C G T A A C T G A C G T C T G A C T G A T C G A T G C A C G T A

Tb_0252(RRM)/Trypanosoma_brucei-RNCMPT00252-PBM/HughesRNA

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGAGTAGAAT
--AGTAGAT-
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C G T C G T A A C T G A C G T C G T A A C T G C T G A C G A T A C G T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00099-PBM/HughesRNA

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGAGTAGAAT
--AGTAGGT-
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C G T C G T A A C T G A C G T C G T A A C T G C A T G C G A T A C G T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00040-PBM/HughesRNA

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGAGTAGAAT
--AGTAGTT-
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C G T C G T A A C T G A C G T C G T A A C T G C A G T C G A T A C G T

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGAGTAGAAT
-GAGTATAA-
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T C T A G G A C T A C T G A C G T C G T A A C G T C G T A C G T A A C G T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00100-PBM/HughesRNA

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGAGTAGAAT
--AGTAGGG-
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C G T C G T A A C T G A C G T C G T A A C T G C A T G C T A G A C G T

MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGAGTAGAAT
--AGTGGAA-
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C G T C G T A C T A G C G A T A C T G A C T G C G T A C G T A A C G T

AT3G24120/MA1388.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGAGTAGAAT---
-----AGAATCTG
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G G T C A C G T A A C G T G T A C C G A T C T A G

TEC1(MacIsaac)/Yeast

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGAGTAGAAT---
-----AGAATGTG
 A G T C A C T G C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C T G A C A G T C T A G G A C T T C A G