Information for 7-MACGTGAGCGAA (Motif 5)

G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A
Reverse Opposite:
A G C T A G C T A G T C A C T G G A T C A C G T G T A C C G T A G T A C C T A G C G A T A C G T
p-value:1e-1013
log p-value:-2.335e+03
Information Content per bp:1.750
Number of Target Sequences with motif4103.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1124.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets99.7 +/- 52.2bp
Average Position of motif in Background101.3 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MACGTGAGCGAA-
-WCGAHDTCGWHN
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A A C G T
A C G T G C A T G A T C C T A G C G T A G C A T C G T A G C A T A G T C C T A G C G T A G C A T C G A T

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:MACGTGAGCGAA---
-ACGAAAGCGAAAGT
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A A C G T A C G T A C G T
A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

Lm_0254(RRM)/Leishmania_major-RNCMPT00254-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:MACGTGAGCGAA
----NGAACGA-
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A
A C G T A C G T A C G T A C G T G C T A A C T G C G T A C G T A A G T C A C T G G T C A A C G T

MAC1(MacIsaac)/Yeast

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:MACGTGAGCGAA--
----TGAGCGAAAA
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G C A T C A G T G A C C T A G C G T A G T C A C T G A C T G A

IRF9/MA0653.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MACGTGAGCGAA---
AACGAAACCGAAACT
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

MAC1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:MACGTGAGCGAA
-----GAGCAAA
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A C G T A C G T A

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---MACGTGAGCGAA
NNNACCGAGAGTNNN
 A C G T A C G T A C G T G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

MAC1/MA0326.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:MACGTGAGCGAA
----TGAGCAAA
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A
A C G T A C G T A C G T A C G T G A C T A C T G C G T A A C T G A G T C C G T A G T C A C G T A

MAC1/MA0326.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:MACGTGAGCGAA
----TGAGCAAA
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A
A C G T A C G T A C G T A C G T G A C T A C T G C G T A A C T G A G T C C G T A G T C A C G T A

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:MACGTGAGCGAA---
-TCGAAACCGAAACT
 G T C A G C T A A G T C A C T G G C A T A C T G C G T A C T A G A G T C A C T G C T G A T C G A A C G T A C G T A C G T
A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T