Information for 12-CGTCCTAA (Motif 8)

A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
Reverse Opposite:
C G A T A C G T C T G A T C A G A C T G C G T A A G T C A C T G
p-value:1e-793
log p-value:-1.826e+03
Information Content per bp:1.825
Number of Target Sequences with motif60476.0
Percentage of Target Sequences with motif8.64%
Number of Background Sequences with motif47132.4
Percentage of Background Sequences with motif6.76%
Average Position of motif in Targets99.9 +/- 53.3bp
Average Position of motif in Background100.3 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ANKHD1(KH)/Homo_sapiens-RNCMPT00002-PBM/HughesRNA

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCTAA
TACGTCT---
 A C G T A C G T A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
G C A T C G T A A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T

At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGTCCTAA
HCACCGACCAHN
 A C G T A C G T A C G T A C G T A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
G A C T G A T C C T G A A G T C A G T C A C T G C G T A A G T C G T A C G C T A G C A T C G A T

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGTCCTAA
-GTCCTAA
 A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
A C G T C T A G A C G T A G T C A G T C A C G T T C G A G C T A

FXR2(KH)/Homo_sapiens-RNCMPT00020-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCTAA
CCCGTCC---
 A C G T A C G T A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
A G T C A G T C A G T C A C T G A C G T A G T C G A T C A C G T A C G T A C G T

At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGTCCTAA-
CACCGACMWWNN
 A C G T A C G T A C G T A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A A C G T
T G A C C T G A A G T C A T G C T C A G G C T A A G T C G T A C G C T A G C A T G C T A G C A T

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCTAA
TCGTCGT--
 A C G T A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
A G C T A G T C A C T G A C G T A G T C A C T G A C G T A C G T A C G T

An_0265(KH)/Aspergillus_nidulans-RNCMPT00265-PBM/HughesRNA

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTCCTAA
-NACCTAA
 A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
A C G T C T G A G T C A A G T C G T A C A G C T G T C A C G T A

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCTAA
TCGTCGTN-
 A C G T A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
A C G T A G T C A C T G A G C T A G T C A C T G A G C T A G C T A C G T

TRB2/MA1073.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGTCCTAA
TGCCCTAA
 A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A
G C A T C T A G G T A C A G T C A G T C A G C T C G T A C T G A

CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGTCCTAA----
NRCCGACDWNNNNNN
 A C G T A C G T A C G T A G T C A C T G G C A T A G T C A G T C A G C T C G T A C G T A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A G T C A C T G C G T A A G T C C T G A G C A T G C T A C T G A G C A T G C A T C G A T G C A T