Home   How to Cite   Contact

1. For Cluster search

 As an atlas tool, users can click on legend or color plot for each cluster.

Example results for cluster search:

2. For Locus search

 Users can choose rice genomes (i.e. Nip or 93-11), input "locus" (e.g. LOC_Os10g07270) and then click on the "Search" label, you can search violin plot, UMAP plot, and t-SNE plot, and gene expression profile by scRNA-seq, and sequence information to eRice (http://www.elabcaas.cn/rice/index.html). 

Example results for locus search:

3. For Genome JBrowse

 In the Genome JBrowse page, users can choose different cluster tracks to obtain genes on the selected region of genome. Example results for locus search: 


Welcome to eLab in CAAS
eLab located at Biotechnology Research Institute, Chinese Academy of Agricultural sciences, 12 Zhongguancun South Street, Beijing, China.

Copyright©2018 eLAbcaas.cn All rights reserved. Design by eLAbcaas.cn.